BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F11LP1|AL429442
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1325 1572 0.0
>3x_Contig1325
Length = 7053
Score = 1572 bits (775), Expect = 0.0
Identities = 855/899 (95%), Gaps = 3/899 (0%)
Strand = Plus / Plus
Query: 1 gttcttatgctaaattgaaattcgaagccggngttcatcgtgttcaaagagtgcctgcca 60
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 683 gttcttatgataaattgaaattcgaagccggagttcatcgtgttcaaagagtgcctgcca 742
Query: 61 cagaatcamagggcagamctcatacttccactgcggccgtcattgtgctacccaamatgg 120
|||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 743 cagaatcaaagggaagaactcatacttccactgcggccgtcattgtgctacccaaaatgg 802
Query: 121 gtgamgamagtgaatctgatsymtacgagaggcctttcaagccagatgagattcgtatcg 180
|||| || |||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 803 gtgaagaaagtgaatctgatgcatacgagaggactttcaagccagatgagattcgtatcg 862
Query: 181 atgtcatgagagccagtggtaaaggtgggcmgcmtgtcaacacyacagattctgctgtca 240
|||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||
Sbjct: 863 atgtcatgagagccagtggtaaaggtgggcagcatgtcaacactacagattctgctgtca 922
Query: 241 ggttgacacattatccatcaggcattgtgatttcmatgcmggaagamaggtctcaacaca 300
|||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 923 ggttgacacattatccatcaggcattgtgatttcaatgcaggaagaaaggtctcaacaca 982
Query: 301 gaaacamagccaaagcctttgcyatcctacgagcmaggttggccgammaggaaaggcttg 360
|||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 983 gaaacaaagccaaagcctttgctatcctacgagcaaggttggccgaaaaggaaaggcttg 1042
Query: 361 agacagaggagamagagaggcatgccaggcaagatcaagtttccacgacagacagatctg 420
||| |||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1043 agaaagaggagaaagagaggaatgcaaggaaagatcaagtttccacgacagacagatctg 1102
Query: 421 acaagmtcagaacttatmatymcccacagaatagaatcacggaccatagatgtggcttca 480
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 acaagatcagaacttataattacccacagaatagaatcacggaccatagatgtggcttca 1162
Query: 481 cactatatgayatcgagggggtcatgaagggtgagaggctagatgatgtcattgaygcya 540
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct: 1163 cactatatgatatcgagggggtcatgaagggtgagaggctagatgatgtaattgatgcta 1222
Query: 541 tggacgcgtttagttctgngcagaaggctaagcaattacttcaggacatgtcagcttgat 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 tggacgcgtttagttctgagcagaaggctaagcaattacttcaggacatgtcagcttgat 1282
Query: 601 caaatattcagttggaaacaccgttctgcgccagggaatgataattggatttacactgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 caaatattcagttggaaacaccgttctgcgccagggaatgataattggatttacactgta 1342
Query: 661 aatagtataaaataaagttgcatatatgtatagaagaaagcaccctgaacatcaatctag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 aatagtataaaataaagttgcatatatgtatagaagaaagcaccctgaacatcaatctag 1402
Query: 721 tgtg-aamctcactcgagggtacgtattggtgtatagtgtgttgctgttttctcacmcag 779
|||| || ||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 1403 tgtgaaacctcactcgagggtacgtattggtgtatagtgtgttgctg-tttctcacccag 1461
Query: 780 ttctttatacgaacmattatacgatttttgactggagaaattgaagtgtcaaaatgcaaa 839
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 ttctttatacgaaccattatacgatttttgactggagaaattgaagtgtcaaaatgcaaa 1521
Query: 840 gtatgcttagatacataatcccttcaacgatgagacaaaatgc-aagcaccaamgggat 897
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 1522 gtatgcttagatacataatcccttcaacgatgagacaaaatgcaaagcaccaacgggat 1580
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3979
Number of Sequences: 1807
Number of extensions: 3979
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)